Protein Information

Protein ZmGATA29
ZmGATA29 is a protein in the C2C2-GATA family.
Information
TF Name:	ZmGATA29
Species:	Maize
TF Family:	C2C2-GATA
Gene Name(Synonym):	GATA29
Uniprot ID:	K7VED2
Subgenome:	1

Overview of domains present in v5 transcripts
	PF00320
Zm00001eb385190_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d046354	DAPseq	sequence	fimo	position
Zm00001d046354	DAPseq	sequence	fimo	position
Zm00001d046354	ChIPseq	sequence	fimo	position
Zm00001d046354	PChIPseq	sequence	fimo	position

Zm00001eb385190_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MSAIYMSQLSTALPLMEGDHQDHHHHHQGHFQAFTLPKETPILFPFVISNSSASEGSLSYGSAADHHLLRQRHQAMLEPQ
HMIGGSSTATGNSVFSTPFPTVESIRDDMIEPASYDPYDMGKLQVGGSMDACSWTPAAAKMRITRKATADPSAGKKPRRR
AQAGYDDTMSGQPNLGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMMAAASGSVSAVPTDSGKASPSNA
AVAAAAAHPKVKKEKRVDVDRSLPFKKRCKVVQQGHGAAVVVAAPAAATDSATVVQATAEDGDDDTCPSRDLLVDDIGGL
ISWSRSPAAPASAAAATCSFRASPALPVQQDEITDAAMLLMTLSCGLVRS

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00320
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Nucleotide Sequence
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TGTAGCTAGCGCATCTATTGTTTGC...

TGTAGCTAGCGCATCTATTGTTTGCTCTCCACATCTCTCTCGTGCGTGTGTCCATGAAAAGGATCACACACGAATGATCTACACAGCCTAGGGAGCTCTCTCCTTTGTCTCTTTATAAAAGGGACATGCCTCTCCCTTCCGTGCATGATCGCTACCTCGCTTTCCCTCTTGATCCCTGGCTGCAAATTGCCATTCCGACATAATAACCACTGCACCAGCCGCTTCGGTTCGCCTCTTCCTACTCTCCATATATCTCATCCTGATCTTCACTCATCACCTAACCATACGAGATCTGCATATATAGCTCCATCAGATCTTGAGCGCAAATTCCTCTCAGTGCATCCCATGTCTGCCATCTACATGAGCCAGCTCTCCACTGCCCTCCCTCTCATGGAGGGAGATCACCAAGATCATCATCACCACCACCAAGGCCACTTCCAGGCCTTCACCCTGCCAAAGGAAACACCGATCCTTTTCCCCTTTGTGATCAGCAATAGTAGCGCCAGCGAAGGCAGTTTGAGCTATGGATCGGCTGCAGACCATCACTTGTTGAGGCAGCGTCATCAAGCTATGCTGGAGCCCCAACATATGATTGGAGGATCATCAACTGCGACTGGGAATAGTGTCTTCTCGACGCCGTTCCCGACCGTGGAGAGCATCCGCGACGACATGATCGAGCCTGCCTCGTACGATCCATACGATATGGGGAAGCTGCAGGTCGGCGGGTCGATGGATGCTTGCAGCTGGACGCCGGCGGCAGCCAAGATGAGGATCACGAGGAAGGCCACTGCCGATCCCAGTGCGGGGAAGAAGCCAAGGAGAAGGGCGCAAGCAGGGTACGACGACACCATGAGCGGCCAACCGAATTTGGGTGTTATTAGGGTGTGCTCCGACTGCAACACCACCAAGACACCCTTGTGGAGGAGTGGTCCTTGCGGCCCCAAGTCGCTCTGCAACGCGTGCGGTATCAGGCAGCGGAAGGCGAGGCGGGCGATGATGGCCGCCGCCTCCGGCTCGGTGTCAGCAGTTCCCACTGACAGCGGCAAGGCCTCGCCCAGCAACGCCGCCGTGGCCGCAGCAGCAGCACACCCCAAGGTGAAGAAGGAGAAGAGAGTGGACGTGGACCGGTCGCTGCCGTTCAAGAAACGGTGCAAGGTGGTCCAGCAAGGTCACGGTGCGGCCGTCGTCGTTGCAGCTCCTGCTGCTGCCACCGACAGCGCGACTGTCGTGCAGGCCACCGCCGAGGATGGTGATGACGACACCTGTCCGAGCAGGGATCTGCTTGTCGACGACATTGGTGGGCTCATCAGCTGGAGCAGGAGTCCGGCGGCACCCGCCTCAGCGGCTGCGGCCACCTGCAGCTTCCGGGCGTCGCCGGCGTTGCCCGTGCAGCAGGACGAGATCACGGACGCTGCCATGCTGCTGATGACGCTGTCCTGCGGGCTTGTCCGGAGCTGATCCACGATCTGCTACCTCTACGAAGGACGACCCAGCGCACCGTAGGCTTTTCCCAGCTAGCAGCTAGCTTGTGCCTTTGACTGTTAGCTAGCGTTACTGTTACTGCTGTTACCATCGTCGTCTACCGTAATACCTGTAGTGCTTTTGTTTAGCTTCTTGTTGCTAGTGTGACCACCCTTGTCACTGTTCAAGTCATGTGATTCGTTCGATGAGTGAGAGAGAGAGAAGAGGTCTAGTTGAGATGATAGGAGCGACAAGAGCACCGTCTCTAGCTACAATAGCTAGTAAATATAATCGCATGTAGTGTGAGGAGTTTCAGTTTTGAGTGTGTACAAGTTCTTTAATTCCGATCCTGTGGCTATAATCTGGTCGCTGGCTGCTGCTACATATTTTTTTATTCTTCCTTTTGCTTGAGTTTCTTTTAAGGAACCTAAAAGTGTAATGGGAATGTTTTGAGACATACCGTCATACCGACGATGCAAGGTGTCGTGCTTGTCTTCCTGGCTACTCGTTCATGGCTTTTGTTTCTGATGCTTCTGTCAGTATGCATACAACATTCTTGTACGTACGTAGTCTCCATTTCAAAATATGATGTGCCTTGATCT

GRMZM2G039586_T01 from maize genome v3

Related TFome: pUT6197

Amino Acid Sequence
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MIATSLSLLIPGCKLPFRHNNHCTSRFGSPLPTLHISHPDLHSSPNHTRSAYIAPSDLERKFLSVHPMSAIYMSQLSTAL
PLMEGDHQDHHHHHQGHFQAFTLPKETPILFPFVISNSSASEGSLSYGSAADHHLLRQRHQAMLEPQHMIGGSSTATGNS
VFSTPFPTVESIRDDMIEPASYDPYDMGKLQVGGSMDACSWTPAAAKMRITRKATADPSAGKKPRRRAQAGYDDTMSGQP
NLGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMMAAASGSVSAVPTDSGKASPSNAAVAAAAAHPKVKK
EKRVDVDRSLPFKKRCKVVQQGHGAAVVVAAPAAATDSATVVQATAEDGDDDTCPSRDLLVDDIGGLISWSRSPAAPASA
AAATCSFRASPALPVQQDEITDAAMLLMTLSCGLVRS

Nucleotide Sequence
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TCTCTCCTTTGTCTCTTTATAAAAG...

Zm00001d046354_T001 from maize genome v4

Amino Acid Sequence
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MSAIYMSQLSTALPLMEGDHQDHHHHHQGHFQAFTLPKETPILFPFVISNSSASEGSLSYGSAADHHLLRQRHQAMLEPQ
HMIGGSSTATGNSVFSTPFPTVESIRDDMIEPASYDPYDMGKLQVGGSMDACSWTPAAAKMRITRKATADPSAGKKPRRR
AQAGYDDTMSGQPNLGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMMAAASGSVSAVPTDSGKASPSNA
AVAAAAAHPKVKKEKRVDVDRSLPFKKRCKVVQQGHGAAVVVAAPAAATDSATVVQATAEDGDDDTCPSRDLLVDDIGGL
ISWSRSPAAPASAAAATCSFRASPALPVQQDEITDAAMLLMTLSCGLVRS

Nucleotide Sequence
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CTCTTGATCCCTGGCTGCAAATTGC...

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Protein ZmGATA29

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmGATA29 is the regulator

Interactions where ZmGATA29 is the target
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Zm00001eb385190_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G039586_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d046354_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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